BioFVM-X

We have developed BioFVM_X as it adds MPI to BioFVM to parallelize the core kernels of BioFVM using MPI.

Institution:

Researcher/s:

Miguel Ponce de León, Arnau Montagud, Gaurav Saxena, David Vicente, Alfonso Valencia

Description:

The motivation of this work is that BioFVM (http://BioFVM.MathCancer.org) supports only on-node shared memory parallelism using OpenMP. We have developed BioFVM_X as it adds MPI to BioFVM to parallelize the core kernels of BioFVM using MPI. Some core kernels are: Domain Partitioning, Basic Agent Generation, Gaussian Profile building, File Writing, Direct Solver (Thomas' algorithm). Most of the MPI-based parallel functions are made available in BioFVM_parallel.cpp.

Problem:

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Solution:

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Aplication areas:

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Novelty:

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Protection:

BSD 3-Clause License

Target market:

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Keywords:

computing architecture, distributed computing

TRL: N/A

CRL: N/A

BRL: N/A

IPRL: N/A

TmRL: N/A

FRL: N/A

More information

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