BioFVM-X

We have developed BioFVM_X as it adds MPI to BioFVM to parallelize the core kernels of BioFVM using MPI.

Institution:

Research Group:

Computational Biology - Life Sciences. Operations

Researcher/s:

Miguel Ponce de León, Arnau Montagud, Gaurav Saxena, David Vicente, Alfonso Valencia

Description:

BioFVM-X extends the open-source BioFVM solver with MPI partitioning of its core kernels (domain decomposition, Gaussian profile build-up, Thomas solver, etc.), allowing tissue-scale diffusion simulations to spill across many nodes. This is a prerequisite for patient-specific “digital-twin” therapy treatment simulations.

BioFVM-X is an MPI-enabled engine that can power digital-twin simulations combining distributed CPU kernels, that helps link tissue-scale predictions to clinical outcomes.

Value Proposition:

Run centimetre-scale tumour microenvironment simulations

Aplication areas:

Digital twins, drug treatment, drug repurposing, virtual clinical trials, diagnostics.

Target market:

Pharmaceutical; Software as a Medical Device.

Protection:

BSD 3-Clause License

More information

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